Index

A

add_noise() (in module wf_psf.utils.utils) apply_obscurations() (wf_psf.psf_models.tf_modules.TF_build_phase method) assign_coeff_matrix() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_layers.TF_poly_Z_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

assign_S_mat() (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_layers.TF_NP_poly_OPD method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

B

build_PSF_model() (in module wf_psf.psf_models.tf_psf_field)

C

calc_poly_position_mat() (in module wf_psf.utils.utils) calc_SED_wave_values() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) calc_wfe() (in module wf_psf.utils.utils) calc_wfe_rms() (in module wf_psf.utils.utils) calculate_mono_PSF() (wf_psf.psf_models.tf_layers.OLD_TF_batch_poly_PSF method) (wf_psf.psf_models.tf_layers.TF_batch_mono_PSF method) (wf_psf.psf_models.tf_layers.TF_batch_poly_PSF method) calculate_opd() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) calculate_poly_PSF() (wf_psf.psf_models.tf_layers.OLD_TF_batch_poly_PSF method) (wf_psf.psf_models.tf_layers.TF_batch_poly_PSF method) calculate_wfe_rms() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) call() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_layers.OLD_TF_batch_poly_PSF method) (wf_psf.psf_models.tf_layers.TF_batch_mono_PSF method) (wf_psf.psf_models.tf_layers.TF_batch_poly_PSF method) (wf_psf.psf_models.tf_layers.TF_NP_GRAPH_OPD method) (wf_psf.psf_models.tf_layers.TF_NP_MCCD_OPD_v2 method) (wf_psf.psf_models.tf_layers.TF_NP_poly_OPD method) (wf_psf.psf_models.tf_layers.TF_physical_layer method) (wf_psf.psf_models.tf_layers.TF_poly_Z_field method) (wf_psf.psf_models.tf_layers.TF_zernike_OPD method) (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

call_plot_config_handler_run() (wf_psf.utils.configs_handler.MetricsConfigHandler method) check_and_update_metrics_confs() (wf_psf.utils.configs_handler.PlottingConfigHandler method) check_wfe_rms() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) compute_metrics() (in module wf_psf.metrics.metrics) compute_mono_metric() (in module wf_psf.metrics.metrics) compute_one_opd_rmse() (in module wf_psf.metrics.metrics) compute_opd_metrics() (in module wf_psf.metrics.metrics) compute_opd_metrics_mccd() (in module wf_psf.metrics.metrics) compute_opd_metrics_param_model() (in module wf_psf.metrics.metrics) compute_opd_metrics_polymodel() (in module wf_psf.metrics.metrics) compute_poly_metric() (in module wf_psf.metrics.metrics) compute_shape_metrics() (in module wf_psf.metrics.metrics) compute_zernikes() (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) ConfigParameterError convert_to_tf() (in module wf_psf.utils.utils) copy_conffile_to_output_dir() (wf_psf.utils.io.FileIOHandler method) crop_img() (wf_psf.psf_models.tf_modules.TF_fft_diffract method) (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method)

D

data_conf (wf_psf.utils.configs_handler.MetricsConfigHandler property) DataConfigHandler (class in wf_psf.utils.configs_handler) decimate_im() (in module wf_psf.utils.utils) (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method)

define_plot_style() (in module wf_psf.plotting.plots_interface) diffract_phase() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) downsample_im() (in module wf_psf.utils.utils)

E

estimate_noise() (wf_psf.utils.utils.NoiseEstimator method) evaluate_metrics_mono_rmse() (wf_psf.metrics.metrics_interface.MetricsParamsHandler method) evaluate_metrics_opd() (wf_psf.metrics.metrics_interface.MetricsParamsHandler method)

evaluate_metrics_polychromatic_lowres() (wf_psf.metrics.metrics_interface.MetricsParamsHandler method) evaluate_metrics_shape() (wf_psf.metrics.metrics_interface.MetricsParamsHandler method) evaluate_model() (in module wf_psf.metrics.metrics_interface)

F

feasible_N() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) feasible_wavelength() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) fft_diffract() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method)

FileIOHandler (class in wf_psf.utils.io) filepath_chkp_callback() (in module wf_psf.training.train) filter_SED() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method)

G

gen_eigenvects() (wf_psf.utils.graph_utils.GraphBuilder method) gen_GT_wf_model() (in module wf_psf.metrics.metrics) gen_Pea() (in module wf_psf.utils.graph_utils) gen_random_Z_coeffs() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) gen_SED_interp() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) gen_SED_sampler() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) general_train_cycle() (in module wf_psf.training.train_utils) generate_mono_PSF() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) generate_packed_elems() (in module wf_psf.utils.utils) generate_poly_PSF() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) generate_pupil_obscurations() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) generate_SED_elems() (in module wf_psf.utils.utils) generate_SED_elems_in_tensorflow() (in module wf_psf.utils.utils) get_checkpoint_dir() (wf_psf.utils.io.FileIOHandler method) get_coeff_matrix() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_layers.TF_poly_Z_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

get_config_dir() (wf_psf.utils.io.FileIOHandler method) get_gpu_info() (in module wf_psf.training.train) get_metrics() (wf_psf.plotting.plots_interface.MetricsPlotHandler method) get_metrics_dir() (wf_psf.utils.io.FileIOHandler method) get_number_of_stars() (in module wf_psf.plotting.plots_interface) get_optimizer_dir() (wf_psf.utils.io.FileIOHandler method) get_plots_dir() (wf_psf.utils.io.FileIOHandler method) get_poly_coefficients_shape() (wf_psf.psf_models.tf_layers.TF_poly_Z_field method) get_psf() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) get_psf_model() (in module wf_psf.psf_models.psf_models) get_psf_model_dir() (wf_psf.utils.io.FileIOHandler method) get_psf_model_weights_filepath() (in module wf_psf.psf_models.psf_models) get_radial_idx() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) get_run_config() (in module wf_psf.utils.configs_handler) get_timestamp() (wf_psf.utils.io.FileIOHandler method) get_z_coeffs() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) GraphBuilder (class in wf_psf.utils.graph_utils) ground_truth_psf_model() (in module wf_psf.metrics.metrics_interface)

I

id (wf_psf.plotting.plots_interface.ShapeMetricsPlotHandler attribute) id_name (wf_psf.training.train.TrainingParamsHandler property) ids (wf_psf.plotting.plots_interface.MetricsPlotHandler attribute) (wf_psf.plotting.plots_interface.MonochromaticMetricsPlotHandler attribute) (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model attribute) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field attribute) (wf_psf.utils.configs_handler.MetricsConfigHandler attribute) (wf_psf.utils.configs_handler.PlottingConfigHandler attribute) (wf_psf.utils.configs_handler.TrainingConfigHandler attribute) IndependentZernikeInterpolation (class in wf_psf.utils.utils) init_coeff_matrix() (wf_psf.psf_models.tf_layers.TF_poly_Z_field method)

init_mono_PSF() (wf_psf.psf_models.tf_layers.TF_batch_mono_PSF method) init_vars() (wf_psf.psf_models.tf_layers.TF_NP_GRAPH_OPD method) (wf_psf.psf_models.tf_layers.TF_NP_MCCD_OPD_v2 method) (wf_psf.psf_models.tf_layers.TF_NP_poly_OPD method) interp_one_zk() (wf_psf.utils.utils.IndependentZernikeInterpolation method) interp_SED() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) interpolate_all() (wf_psf.psf_models.tf_layers.TF_physical_layer method) interpolate_independent_Zk() (wf_psf.psf_models.tf_layers.TF_physical_layer method) interpolate_top_K() (wf_psf.psf_models.tf_layers.TF_physical_layer method) interpolate_zk() (wf_psf.utils.utils.ZernikeInterpolation method) interpolate_zks() (wf_psf.utils.utils.IndependentZernikeInterpolation method) (wf_psf.utils.utils.ZernikeInterpolation method)

L

l1_schedule_rule() (in module wf_psf.training.train_utils) L1ParamScheduler (class in wf_psf.training.train_utils) learning_rate_non_params (wf_psf.training.train.TrainingParamsHandler property)

learning_rate_params (wf_psf.training.train.TrainingParamsHandler property) load_metrics_into_dict() (wf_psf.utils.configs_handler.PlottingConfigHandler method) load_multi_cycle_params_click() (in module wf_psf.utils.utils)

M

mainMethod() (in module wf_psf.run) make_dict_of_metrics() (wf_psf.utils.configs_handler.PlottingConfigHandler method) make_plot() (in module wf_psf.plotting.plots_interface) map_entry() (wf_psf.utils.read_config.RecursiveNamespace static method) metrics_conf (wf_psf.utils.configs_handler.MetricsConfigHandler property) metrics_dir (wf_psf.utils.configs_handler.MetricsConfigHandler property) MetricsConfigHandler (class in wf_psf.utils.configs_handler) MetricsParamsHandler (class in wf_psf.metrics.metrics_interface) MetricsPlotHandler (class in wf_psf.plotting.plots_interface) model_name (wf_psf.training.train.TrainingParamsHandler property) model_params (wf_psf.training.train.TrainingParamsHandler property) module wf_psf wf_psf.data wf_psf.data.training_preprocessing wf_psf.metrics wf_psf.metrics.metrics wf_psf.metrics.metrics_interface wf_psf.plotting wf_psf.plotting.plots_interface wf_psf.psf_models wf_psf.psf_models.psf_model_parametric wf_psf.psf_models.psf_model_semiparametric wf_psf.psf_models.psf_models wf_psf.psf_models.tf_layers wf_psf.psf_models.tf_modules wf_psf.psf_models.tf_psf_field wf_psf.psf_models.zernikes wf_psf.run wf_psf.sims wf_psf.sims.SimPSFToolkit wf_psf.training wf_psf.training.train wf_psf.training.train_utils wf_psf.utils wf_psf.utils.configs_handler wf_psf.utils.graph_utils wf_psf.utils.io wf_psf.utils.read_config wf_psf.utils.utils

MonochromaticMetricsPlotHandler (class in wf_psf.plotting.plots_interface) multi_cycle_params (wf_psf.training.train.TrainingParamsHandler property)

N

n_epochs_non_params (wf_psf.training.train.TrainingParamsHandler property) n_epochs_params (wf_psf.training.train.TrainingParamsHandler property)

NoiseEstimator (class in wf_psf.utils.utils) normalize_psf() (wf_psf.psf_models.tf_modules.TF_fft_diffract method) normalize_zernikes() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method)

O

OLD_TF_batch_poly_PSF (class in wf_psf.psf_models.tf_layers) on_epoch_begin() (wf_psf.training.train_utils.L1ParamScheduler method)

opd_phase_plotter() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) opd_to_phase() (wf_psf.psf_models.tf_modules.TF_build_phase method)

P

pairwise_distances() (in module wf_psf.utils.graph_utils) param_train_cycle() (in module wf_psf.training.train_utils) PI_zernikes() (in module wf_psf.utils.utils) pick_emax() (wf_psf.utils.graph_utils.GraphBuilder method) plot() (wf_psf.plotting.plots_interface.MetricsPlotHandler method) (wf_psf.plotting.plots_interface.MonochromaticMetricsPlotHandler method) (wf_psf.plotting.plots_interface.ShapeMetricsPlotHandler method) plot_function() (in module wf_psf.metrics.metrics) plot_imgs() (in module wf_psf.metrics.metrics) plot_metrics() (in module wf_psf.plotting.plots_interface) plot_opd_phase() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) plot_psf() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) plot_residual_maps() (in module wf_psf.metrics.metrics) plot_z_coeffs() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) plotting_conf (wf_psf.utils.configs_handler.MetricsConfigHandler property) PlottingConfigHandler (class in wf_psf.utils.configs_handler) predict() (wf_psf.psf_models.tf_layers.TF_NP_GRAPH_OPD method) (wf_psf.psf_models.tf_layers.TF_NP_MCCD_OPD_v2 method) predict_mono_psfs() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

predict_opd() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method) predict_step() (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) predict_zernikes() (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) project_DD_features() (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method) psf_model (wf_psf.utils.configs_handler.MetricsConfigHandler property) psf_plotter() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) PsfModelError

R

read_conf() (in module wf_psf.utils.read_config) read_stream() (in module wf_psf.utils.read_config) read_yaml() (in module wf_psf.utils.read_config) RecursiveNamespace (class in wf_psf.utils.read_config) register_configclass() (in module wf_psf.utils.configs_handler)

register_psfclass() (in module wf_psf.psf_models.psf_models) resize() (in module wf_psf.sims.SimPSFToolkit) (in module wf_psf.utils.utils) run() (wf_psf.utils.configs_handler.MetricsConfigHandler method) (wf_psf.utils.configs_handler.PlottingConfigHandler method) (wf_psf.utils.configs_handler.TrainingConfigHandler method)

S

scale_to_range() (in module wf_psf.utils.utils) SED_gen_noise() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit static method) select_params() (wf_psf.utils.graph_utils.GraphBuilder method) select_vstar() (in module wf_psf.utils.graph_utils) set_alpha_identity() (wf_psf.psf_models.tf_layers.TF_NP_GRAPH_OPD method) (wf_psf.psf_models.tf_layers.TF_NP_MCCD_OPD_v2 method) (wf_psf.psf_models.tf_layers.TF_NP_poly_OPD method) set_alpha_zero() (wf_psf.psf_models.tf_layers.TF_NP_GRAPH_OPD method) (wf_psf.psf_models.tf_layers.TF_NP_MCCD_OPD_v2 method) (wf_psf.psf_models.tf_layers.TF_NP_poly_OPD method) set_lambda_phaseN() (wf_psf.psf_models.tf_layers.TF_batch_mono_PSF method) set_nonzero_nonparam() (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method) set_output_params() (wf_psf.psf_models.tf_layers.TF_batch_mono_PSF method) set_output_Q() (wf_psf.psf_models.psf_model_parametric.TF_PSF_field_model method) (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_GT_physical_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_PSF_field_model method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method)

set_psf_batch() (wf_psf.psf_models.tf_layers.OLD_TF_batch_poly_PSF method) set_psf_model() (in module wf_psf.psf_models.psf_models) set_run_config() (in module wf_psf.utils.configs_handler) set_trainable_layers() (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method) set_z_coeffs() (wf_psf.sims.SimPSFToolkit.SimPSFToolkit method) set_zero_nonparam() (wf_psf.psf_models.psf_model_semiparametric.TF_SemiParam_field method) (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method) (wf_psf.psf_models.tf_psf_field.TF_SemiParam_field method) setProgramOptions() (in module wf_psf.run) setup_outputs() (wf_psf.utils.io.FileIOHandler method) setup_training() (in module wf_psf.training.train) ShapeMetricsPlotHandler (class in wf_psf.plotting.plots_interface) sigma_mad() (wf_psf.utils.utils.NoiseEstimator static method) simPSF() (in module wf_psf.psf_models.psf_models) SimPSFToolkit (class in wf_psf.sims.SimPSFToolkit)

T

TestDataHandler (class in wf_psf.data.training_preprocessing) TF_batch_mono_PSF (class in wf_psf.psf_models.tf_layers) TF_batch_poly_PSF (class in wf_psf.psf_models.tf_layers) TF_build_phase (class in wf_psf.psf_models.tf_modules) tf_crop_img() (wf_psf.psf_models.tf_modules.TF_fft_diffract method) TF_fft_diffract (class in wf_psf.psf_models.tf_modules) TF_GT_physical_field (class in wf_psf.psf_models.tf_psf_field) TF_mono_PSF (class in wf_psf.psf_models.tf_modules) TF_NP_GRAPH_OPD (class in wf_psf.psf_models.tf_layers) TF_NP_MCCD_OPD_v2 (class in wf_psf.psf_models.tf_layers) TF_NP_poly_OPD (class in wf_psf.psf_models.tf_layers) tf_obscurations() (in module wf_psf.psf_models.psf_models) TF_physical_layer (class in wf_psf.psf_models.tf_layers) TF_physical_poly_field (class in wf_psf.psf_models.tf_psf_field) TF_poly_Z_field (class in wf_psf.psf_models.tf_layers)

TF_PSF_field_model (class in wf_psf.psf_models.psf_model_parametric) (class in wf_psf.psf_models.tf_psf_field) TF_SemiParam_field (class in wf_psf.psf_models.psf_model_semiparametric) (class in wf_psf.psf_models.tf_psf_field) tf_zernike_cube() (in module wf_psf.psf_models.psf_models) TF_Zernike_mono_PSF (class in wf_psf.psf_models.tf_modules) TF_zernike_OPD (class in wf_psf.psf_models.tf_layers) (class in wf_psf.psf_models.tf_modules) total_cycles (wf_psf.training.train.TrainingParamsHandler property) train() (in module wf_psf.training.train) training_conf (wf_psf.utils.configs_handler.MetricsConfigHandler property) training_hparams (wf_psf.training.train.TrainingParamsHandler property) TrainingConfigHandler (class in wf_psf.utils.configs_handler) TrainingDataHandler (class in wf_psf.data.training_preprocessing) TrainingParamsHandler (class in wf_psf.training.train)

W

weights_basename_filepath (wf_psf.utils.configs_handler.MetricsConfigHandler property) weights_path (wf_psf.utils.configs_handler.MetricsConfigHandler property) wf_psf module wf_psf.data module wf_psf.data.training_preprocessing module wf_psf.metrics module wf_psf.metrics.metrics module wf_psf.metrics.metrics_interface module wf_psf.plotting module wf_psf.plotting.plots_interface module wf_psf.psf_models module wf_psf.psf_models.psf_model_parametric module wf_psf.psf_models.psf_model_semiparametric module wf_psf.psf_models.psf_models module wf_psf.psf_models.tf_layers module wf_psf.psf_models.tf_modules module

wf_psf.psf_models.tf_psf_field module wf_psf.psf_models.zernikes module wf_psf.run module wf_psf.sims module wf_psf.sims.SimPSFToolkit module wf_psf.training module wf_psf.training.train module wf_psf.training.train_utils module wf_psf.utils module wf_psf.utils.configs_handler module wf_psf.utils.graph_utils module wf_psf.utils.io module wf_psf.utils.read_config module wf_psf.utils.utils module

Z

zernike_generator() (in module wf_psf.psf_models.zernikes) (in module wf_psf.utils.utils)

ZernikeInterpolation (class in wf_psf.utils.utils) zero_padding_diffraction() (wf_psf.psf_models.tf_modules.TF_build_phase method) zks_pad() (wf_psf.psf_models.tf_psf_field.TF_physical_poly_field method)