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Index

_

__call__() (DESRho2SysTest method) (DESRho3SysTest method) (DESRho4SysTest method) (DESRho5SysTest method) (Rho1SysTest method) (vosHandler method) _abc_impl (CustomParser attribute) _add2dict() (SaveCatalogue method) _append_col() (FITSCatalogue method) _apply_func() (StrInterpreter method) _build_final_mask() (Mask method) _check_dependencies() (ShapePipe method) _check_exception_status() (JobHandler method) _check_executable() (DependencyHandler static method) _check_for_errors() (JobHandler method) _check_input_dir_list() (FileHandler method) _check_key_for_plot() (SEPlot method) _check_missed_processes() (JobHandler method) _check_module_versions() (ShapePipe method) _check_stderr_status() (JobHandler method) _check_system_setup() (ShapePipe method) _check_vos_install() (vosHandler static method) _clean_line() (SETools method) _compare() (StrInterpreter method) _convert_to_float() (DependencyHandler static method) _copy_config_to_log() (FileHandler method) _create_mask() (Mask method) _create_module_run_dirs() (FileHandler method) _create_pipeline_log() (ShapePipe method) _create_worker_log() (WorkerHandler method) _distribute_smp_jobs() (JobHandler method) _exec_WW() (Mask method) _file_exists() (BaseCatalogue method) _format_process_list() (FileHandler method) _generate_re_pattern() (FileHandler static method) _get_config() (Mask method) _get_file_name() (FileHandler static method) _get_fits_col_type() (FITSCatalogue method) _get_galaxy_positions() (MCCDinterpolator method) (PSFExInterpolator method) _get_image_radius() (Mask method) _get_indices() (DependencyHandler static method) _get_input_dir() (FileHandler method) _get_module_depends() (ShapePipe method) _get_module_input_files() (FileHandler method) _get_module_run_methods() (ShapePipe method) _get_module_run_name() (FileHandler static method) _get_position_parameters() (MCCDinterpolator method) (PSFExInterpolator method) _get_psfexcatdict() (MCCDinterpolator method) (PSFExInterpolator method) _get_psfshapes() (MCCDinterpolator method) (PSFExInterpolator method) _get_python_col_type() (FITSCatalogue method) _get_re() (FileHandler class method) _get_stamp() (VignetMaker method) _get_stamp_me() (VignetMaker method) _get_starshapes() (MCCDinterpolator method) (PSFExInterpolator method) _get_temp_dir_path() (Mask method) _get_value() (StrInterpreter method) _init_stat_function() (StrInterpreter method) _input_dir (FileHandler property) _interpolate() (PSFExInterpolator method)

_interpolate_me() (MCCDinterpolator method) (PSFExInterpolator method) _log_job_parameters() (JobHandler method) _log_num_processes() (JobHandler method) _log_stdout() (WorkerHandler method) _make_hist() (SEPlot method) _make_mask() (SETools method) _make_new_cat() (SETools method) _make_plot() (SEPlot method) (SETools method) _make_rand_split() (SETools method) _make_scatter() (SEPlot method) _make_star_cat() (Mask method) _make_stat() (SETools method) _mask_to_file() (Mask method) _mean() (StrInterpreter method) _mode() (StrInterpreter method) _operate() (StrInterpreter method) _output_dir (FileHandler property) _prep_run() (ShapePipe method) _prepare_worker() (WorkerHandler method) _read_file() (PythonExample method) _remove_mmaps() (FileHandler static method) _run_module() (WorkerHandler method) _run_worker() (WorkerHandler method) _save_from_recarray() (FITSCatalogue method) _save_galsim_shapes() (SaveCatalogue method) _save_image() (FITSCatalogue method) _save_match_patterns() (FileHandler static method) _save_ngmix_data() (SaveCatalogue method) _save_num_patterns() (FileHandler method) _save_process_list() (FileHandler method) _save_psf_data() (SaveCatalogue method) _save_to_fits() (FITSCatalogue method) _save_vignet_me() (VignetMaker method) _set_defaults() (SetUpParser method) _set_execution_options() (SetUpParser method) _set_file_options() (SetUpParser method) _set_image_coordinates() (Mask method) _set_job_name() (WorkerHandler static method) _set_module_input_dir() (FileHandler method) _set_module_properties() (FileHandler method) _set_module_property() (FileHandler method) _set_run_name() (ShapePipe method) _set_worker_options() (SetUpParser method) _sigma_mad() (StrInterpreter method) _slice_1d() (DependencyHandler static method) _slice_2d() (DependencyHandler class method) _slice_col_val() (DependencyHandler class method) _split_string() (DependencyHandler method) _split_strings() (DependencyHandler method) _string_op_func() (StrInterpreter method) _strip_dir_from_file() (FileHandler static method) _test_homogeneity() (StrInterpreter method) _unique_dependencies() (DependencyHandler method) _update_dict() (SaveCatalogue method) _wait() (PythonExample method) _worker_execution() (WorkerHandler method) _write() (RunLog method) _write_output() (MCCDinterpolator method) (PSFExInterpolator method) _write_output_me() (MCCDinterpolator method) (PSFExInterpolator method) _write_output_validation() (MCCDinterpolator method) (PSFExInterpolator method)

A

add_col() (BaseCatalogue method) (FITSCatalogue method)

add_header_card() (FITSCatalogue method) Append (BaseCatalogue.OpenMode attribute) apply_mask() (FITSCatalogue method)

B

backend (JobHandler property) BaseCatalogue (class in shapepipe.pipeline.file_io) BaseCatalogue.catalogueFileNotFound BaseCatalogue.catalogueNotCreated BaseCatalogue.catalogueNotOpen BaseCatalogue.Column (class in shapepipe.pipeline.file_io) BaseCatalogue.ColumnNotFound

BaseCatalogue.DataNotFound BaseCatalogue.FeatureNotImplemented BaseCatalogue.InputFormat (class in shapepipe.pipeline.file_io) BaseCatalogue.OpenMode (class in shapepipe.pipeline.file_io) BaseCatalogue.OpenModeConflict BaseCatalogue.OpenModeNotSupported batch_size (JobHandler property)

C

CfisError check_dec() (in module shapepipe.utilities.cfis) check_dependencies() (DependencyHandler method) check_dir() (FileHandler class method) (in module shapepipe.utilities.file_system) check_dirs() (FileHandler class method) check_duplicate() (in module shapepipe.pipeline.shared) check_executable() (in module shapepipe.pipeline.execute) check_executables() (DependencyHandler method) check_ra() (in module shapepipe.utilities.cfis) clean_up() (JobHandler method) close() (FITSCatalogue method) close_pipeline_log() (ShapePipe method) col_exists() (FITSCatalogue method) command (vosHandler property)

comment (FITSCatalogue.Column property) compile_results() (Ngmix method) config (JobHandler property) convert_pos() (VignetMaker method) copy_hdu() (FITSCatalogue method) create() (FITSCatalogue method) create_arg_parser() (in module shapepipe.pipeline.args) create_config_parser() (in module shapepipe.pipeline.config) create_from_numpy() (FITSCatalogue method) create_global_run_dirs() (FileHandler method) create_hdus() (SplitExposures method) create_image_list() (in module shapepipe.utilities.cfis) CustomParser (class in shapepipe.pipeline.config) cut() (image method) cutomFormatter (class in shapepipe.pipeline.args)

D

data (BaseCatalogue.Column property) (FITSCatalogue.Column property) depend (DependencyHandler property) DependencyHandler (class in shapepipe.pipeline.dependency_handler) DESRho2SysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities) DESRho3SysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities)

DESRho4SysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities) DESRho5SysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities) dir_list() (in module shapepipe.utilities.canfar) directory (BaseCatalogue property) do_ngmix_metacal() (in module shapepipe.modules.ngmix_package.ngmix) download() (in module shapepipe.utilities.canfar)

E

exclude() (in module shapepipe.utilities.cfis)

execute (DependencyHandler property) execute() (in module shapepipe.pipeline.execute)

F

file_name (SetUpParser property) FileHandler (class in shapepipe.pipeline.file_handler) filename (BaseCatalogue property) FileSystemError find_files() (in module shapepipe.pipeline.shared) find_image_at_coord() (in module shapepipe.utilities.cfis) find_images_in_area() (in module shapepipe.utilities.cfis) find_stars() (Mask method) FindExposures (class in shapepipe.modules.find_exposures_package.find_exposures)

finish_up() (JobHandler method) FITS (BaseCatalogue.InputFormat attribute) FITS_LDAC (BaseCatalogue.InputFormat attribute) FITSCatalogue (class in shapepipe.pipeline.file_io) FITSCatalogue.Column (class in shapepipe.pipeline.file_io) flatten_list() (FileHandler static method) format (BaseCatalogue property) (BaseCatalogue.Column property) (FITSCatalogue.Column property) fullpath (BaseCatalogue property)

G

generate_command() (PSFExCaller method) get_add_module_property() (FileHandler method) get_all() (in module shapepipe.pipeline.run_log) get_Angle() (in module shapepipe.utilities.cfis) get_Angle_arr() (in module shapepipe.utilities.cfis) get_background() (SExtractorCaller method) get_cat() (in module shapepipe.modules.match_external_package.match_external) get_check_image() (SExtractorCaller method) get_col_comments() (FITSCatalogue method) get_col_data() (FITSCatalogue method) get_col_formats() (BaseCatalogue method) (FITSCatalogue method) get_col_index() (FITSCatalogue method) get_col_names() (BaseCatalogue method) (FITSCatalogue method) get_comments() (FITSCatalogue method) get_data() (FITSCatalogue method) (in module shapepipe.modules.match_external_package.match_external) get_exposure_list() (FindExposures method) get_ext_name() (FITSCatalogue method) get_file_list() (GetImages method) get_file_pattern() (in module shapepipe.utilities.cfis) get_guess() (in module shapepipe.modules.ngmix_package.ngmix) get_header() (FITSCatalogue method) get_header_value() (FITSCatalogue method) (in module shapepipe.modules.sextractor_package.sextractor_script) get_headers() (FITSCatalogue method) get_ID() (image method) get_image_list() (in module shapepipe.utilities.cfis) get_info() (BaseCatalogue.Column method) (FITSCatalogue method) get_jacob() (in module shapepipe.modules.ngmix_package.ngmix) get_last() (in module shapepipe.pipeline.run_log) get_last_dir() (in module shapepipe.pipeline.run_log)

get_list() (in module shapepipe.pipeline.run_log) get_log_file() (in module shapepipe.utilities.cfis) get_model() (in module shapepipe.modules.spread_model_package.spread_model) get_module_config_sec() (FileHandler method) get_module_current_run() (FileHandler method) get_module_run_prop() (FileHandler method) get_module_runners() (in module shapepipe.modules.module_runners) get_named_col_data() (FITSCatalogue method) get_nb_cols() (BaseCatalogue method) (FITSCatalogue method) get_nb_rows() (BaseCatalogue method) (BaseCatalogue.Column method) (FITSCatalogue method) get_noise() (in module shapepipe.modules.ngmix_package.ngmix) get_original_vignet() (in module shapepipe.modules.vignetmaker_package.vignetmaker) get_output_name() (SExtractorCaller method) get_parser() (SetUpParser method) get_pos() (VignetMaker method) get_prior() (Ngmix method) get_ra_dec() (in module shapepipe.modules.match_external_package.match_external) get_run() (RunLog method) get_sm() (in module shapepipe.modules.spread_model_package.spread_model) get_tile_coord_from_nixy() (in module shapepipe.utilities.cfis) get_tile_name() (in module shapepipe.utilities.cfis) get_tile_number() (in module shapepipe.utilities.cfis) get_tile_number_from_coord() (in module shapepipe.utilities.cfis) get_tile_number_list() (in module shapepipe.utilities.cfis) get_type() (BaseCatalogue.Column method) get_unit_from_fits_header() (in module shapepipe.pipeline.file_io) get_worker_log_name() (FileHandler method) get_zero_point() (SExtractorCaller method) getexpanded() (CustomParser method) GetImages (class in shapepipe.modules.get_images_package.get_images) getlist() (CustomParser method)

H

hdu_no (FITSCatalogue property)

hms2sec() (JobHandler static method)

I

image (class in shapepipe.utilities.cfis) in2out_pattern() (in module shapepipe.modules.get_images_package.get_images)

interp_MCCD() (in module shapepipe.modules.mccd_package.mccd_interpolation_script) interpret() (StrInterpreter method) interpsfex() (in module shapepipe.modules.psfex_interp_package.psfex_interp)

J

job_type (JobHandler property)

JobHandler (class in shapepipe.pipeline.job_handler)

L

log (JobHandler property) log_command() (in module shapepipe.utilities.cfis) long_name (DESRho2SysTest attribute) (DESRho3SysTest attribute) (DESRho4SysTest attribute) (DESRho5SysTest attribute) (Rho1SysTest attribute)

M

make_catalogue() (new_BaseCorrelationFunctionSysTest method) make_command_line() (SExtractorCaller method) make_galsimfit() (in module shapepipe.modules.ngmix_package.ngmix) make_mask() (in module shapepipe.modules.vignetmaker_package.vignetmaker) (Mask method) make_post_process() (in module shapepipe.modules.sextractor_package.sextractor_script) Mask (class in shapepipe.modules.mask_package.mask) mask_border() (Mask method) mask_dso() (Mask method) MatchCats (class in shapepipe.modules.match_external_package.match_external) mccd_fit_pipeline() (in module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd) mccd_interpolation_pipeline() (in module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd) mccd_preprocessing_pipeline() (in module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd) mccd_validation_pipeline() (in module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd) MCCDinterpolator (class in shapepipe.modules.mccd_package.mccd_interpolation_script) mean_calc() (MergeStarCatMCCD static method) mean_shapes_plot() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) megacam_flip() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) megacam_flip_2() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) megacam_pos() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) MegaCamFlip() (Ngmix class method) merge_headers() (in module shapepipe.modules.merge_headers_package.merge_headers) MergeSep (class in shapepipe.modules.merge_sep_cats_package.merge_sep_cats) MergeStarCatMCCD (class in shapepipe.modules.merge_starcat_package.merge_starcat) MergeStarCatPSFEX (class in shapepipe.modules.merge_starcat_package.merge_starcat) missing_data() (Mask method) mkdir() (FileHandler class method) (in module shapepipe.utilities.file_system) module shapepipe shapepipe.info shapepipe.modules shapepipe.modules.find_exposures_package shapepipe.modules.find_exposures_package.find_exposures shapepipe.modules.get_images_package shapepipe.modules.get_images_package.get_images shapepipe.modules.make_cat_package shapepipe.modules.make_cat_package.make_cat shapepipe.modules.mask_package shapepipe.modules.mask_package.mask shapepipe.modules.match_external_package shapepipe.modules.match_external_package.match_external shapepipe.modules.mccd_package shapepipe.modules.mccd_package.mccd_interpolation_script shapepipe.modules.mccd_package.mccd_plot_utilities shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd shapepipe.modules.merge_headers_package shapepipe.modules.merge_headers_package.merge_headers shapepipe.modules.merge_sep_cats_package shapepipe.modules.merge_sep_cats_package.merge_sep_cats shapepipe.modules.merge_starcat_package shapepipe.modules.merge_starcat_package.merge_starcat shapepipe.modules.module_decorator shapepipe.modules.module_runners shapepipe.modules.ngmix_package shapepipe.modules.ngmix_package.ngmix shapepipe.modules.pastecat_package shapepipe.modules.pastecat_package.pastecat shapepipe.modules.psfex_interp_package shapepipe.modules.psfex_interp_package.psfex_interp shapepipe.modules.psfex_package shapepipe.modules.psfex_package.psfex_script shapepipe.modules.python_example_package shapepipe.modules.python_example_package.python_example shapepipe.modules.random_cat_package shapepipe.modules.random_cat_package.random_cat shapepipe.modules.setools_package shapepipe.modules.setools_package.setools shapepipe.modules.sextractor_package shapepipe.modules.sextractor_package.sextractor_script shapepipe.modules.split_exp_package shapepipe.modules.split_exp_package.split_exp shapepipe.modules.spread_model_package shapepipe.modules.spread_model_package.spread_model shapepipe.modules.uncompress_fits_package shapepipe.modules.uncompress_fits_package.uncompress_fits shapepipe.modules.vignetmaker_package shapepipe.modules.vignetmaker_package.vignetmaker shapepipe.pipeline shapepipe.pipeline.args shapepipe.pipeline.config shapepipe.pipeline.dependency_handler shapepipe.pipeline.execute shapepipe.pipeline.file_handler shapepipe.pipeline.file_io shapepipe.pipeline.job_handler shapepipe.pipeline.mpi_run shapepipe.pipeline.run_log shapepipe.pipeline.shared shapepipe.pipeline.str_handler shapepipe.pipeline.timeout shapepipe.pipeline.worker_handler shapepipe.run shapepipe.utilities shapepipe.utilities.canfar shapepipe.utilities.cfis shapepipe.utilities.file_system shapepipe.utilities.galaxy

module_runner() (in module shapepipe.modules.module_decorator) module_str() (in module shapepipe.pipeline.args) my_string_split() (in module shapepipe.utilities.cfis)

N

name (BaseCatalogue.Column property) (FITSCatalogue.Column property)

neg_dash() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) new_BaseCorrelationFunctionSysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities) Ngmix (class in shapepipe.modules.ngmix_package.ngmix)

O

objects_list (DESRho2SysTest attribute) (DESRho3SysTest attribute) (DESRho4SysTest attribute) (DESRho5SysTest attribute) (Rho1SysTest attribute)

open() (FITSCatalogue method) open_mode (FITSCatalogue property)

P

parallel_mode (JobHandler property) param (class in shapepipe.utilities.cfis) parse_errors() (PSFExCaller static method) (SExtractorCaller static method) PasteCat (class in shapepipe.modules.pastecat_package.pastecat) plot_area() (in module shapepipe.utilities.cfis) plot_init() (in module shapepipe.utilities.cfis) plot_meanshapes() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) prepare_final_cat_file() (in module shapepipe.modules.make_cat_package.make_cat) print() (image method) (param method) print_header() (image method) print_message() (in module shapepipe.pipeline.args) process() (FindExposures method) (GetImages method) (MatchCats method) (MergeSep method) (MergeStarCatMCCD method) (MergeStarCatPSFEX method) (Ngmix method) (PasteCat method) (PSFExInterpolator method) (RandomCat method) (SaveCatalogue method) (SETools method) (SplitExposures method) (SpreadModel method) (Uncompress method) (VignetMaker method)

process_me() (MCCDinterpolator method) (PSFExInterpolator method) (VignetMaker method) process_validation() (PSFExInterpolator method) PSFExCaller (class in shapepipe.modules.psfex_package.psfex_script) PSFExInterpolator (class in shapepipe.modules.psfex_interp_package.psfex_interp) PythonExample (class in shapepipe.modules.python_example_package.python_example)

R

RandomCat (class in shapepipe.modules.random_cat_package.random_cat) read() (SETools method) read_files() (PythonExample method) read_image_numbers() (in module shapepipe.modules.get_images_package.get_images) read_list() (in module shapepipe.utilities.cfis) read_number_list() (FileHandler static method) ReadOnly (BaseCatalogue.OpenMode attribute) ReadWrite (BaseCatalogue.OpenMode attribute) record_mode() (ShapePipe method) remove_col() (FITSCatalogue method) remove_field_name() (in module shapepipe.modules.make_cat_package.make_cat) remove_named_col() (FITSCatalogue method) remove_process_mmap() (FileHandler method) required_quantities (DESRho2SysTest attribute) (DESRho3SysTest attribute) (DESRho4SysTest attribute) (DESRho5SysTest attribute) (Rho1SysTest attribute)

retrieve() (GetImages method) retrieve_one() (GetImages method) Rho1SysTest (class in shapepipe.modules.mccd_package.mccd_plot_utilities) rho_stats() (in module shapepipe.modules.mccd_package.mccd_plot_utilities) rmse_calc() (MergeStarCatMCCD static method) rmse_calc_2() (MergeStarCatMCCD static method) run() (in module shapepipe.run) run_dir (FileHandler property) run_mpi() (in module shapepipe.run) run_smp() (in module shapepipe.run) RunLog (class in shapepipe.pipeline.run_log)

S

save() (FITSCatalogue method) save_as_fits() (FITSCatalogue method) save_as_healpix() (RandomCat method) save_mask() (SETools method) save_new_cat() (SETools method) save_rand_split() (SETools method) save_results() (Ngmix method) (SpreadModel method) save_sextractor_data() (in module shapepipe.modules.make_cat_package.make_cat) save_sm_data() (in module shapepipe.modules.make_cat_package.make_cat) save_stat() (SETools method) save_vignet() (in module shapepipe.modules.vignetmaker_package.vignetmaker) SaveCatalogue (class in shapepipe.modules.make_cat_package.make_cat) SEPlot (class in shapepipe.modules.setools_package.setools) set_input_files() (SExtractorCaller method) set_up() (ShapePipe method) set_up_module() (FileHandler method) SETools (class in shapepipe.modules.setools_package.setools) setpath() (FileHandler static method) SetUpParser (class in shapepipe.pipeline.config) SExtractor (BaseCatalogue.InputFormat attribute) SExtractorCaller (class in shapepipe.modules.sextractor_package.sextractor_script) shapepipe module ShapePipe (class in shapepipe.run) shapepipe.info module shapepipe.modules module shapepipe.modules.find_exposures_package module shapepipe.modules.find_exposures_package.find_exposures module shapepipe.modules.get_images_package module shapepipe.modules.get_images_package.get_images module shapepipe.modules.make_cat_package module shapepipe.modules.make_cat_package.make_cat module shapepipe.modules.mask_package module shapepipe.modules.mask_package.mask module shapepipe.modules.match_external_package module shapepipe.modules.match_external_package.match_external module shapepipe.modules.mccd_package module shapepipe.modules.mccd_package.mccd_interpolation_script module shapepipe.modules.mccd_package.mccd_plot_utilities module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd module shapepipe.modules.merge_headers_package module shapepipe.modules.merge_headers_package.merge_headers module shapepipe.modules.merge_sep_cats_package module shapepipe.modules.merge_sep_cats_package.merge_sep_cats module shapepipe.modules.merge_starcat_package module shapepipe.modules.merge_starcat_package.merge_starcat module shapepipe.modules.module_decorator module shapepipe.modules.module_runners module shapepipe.modules.ngmix_package module shapepipe.modules.ngmix_package.ngmix module shapepipe.modules.pastecat_package module shapepipe.modules.pastecat_package.pastecat module shapepipe.modules.psfex_interp_package module shapepipe.modules.psfex_interp_package.psfex_interp module shapepipe.modules.psfex_package module shapepipe.modules.psfex_package.psfex_script module shapepipe.modules.python_example_package module

shapepipe.modules.python_example_package.python_example module shapepipe.modules.random_cat_package module shapepipe.modules.random_cat_package.random_cat module shapepipe.modules.setools_package module shapepipe.modules.setools_package.setools module shapepipe.modules.sextractor_package module shapepipe.modules.sextractor_package.sextractor_script module shapepipe.modules.split_exp_package module shapepipe.modules.split_exp_package.split_exp module shapepipe.modules.spread_model_package module shapepipe.modules.spread_model_package.spread_model module shapepipe.modules.uncompress_fits_package module shapepipe.modules.uncompress_fits_package.uncompress_fits module shapepipe.modules.vignetmaker_package module shapepipe.modules.vignetmaker_package.vignetmaker module shapepipe.pipeline module shapepipe.pipeline.args module shapepipe.pipeline.config module shapepipe.pipeline.dependency_handler module shapepipe.pipeline.execute module shapepipe.pipeline.file_handler module shapepipe.pipeline.file_io module shapepipe.pipeline.job_handler module shapepipe.pipeline.mpi_run module shapepipe.pipeline.run_log module shapepipe.pipeline.shared module shapepipe.pipeline.str_handler module shapepipe.pipeline.timeout module shapepipe.pipeline.worker_handler module shapepipe.run module shapepipe.utilities module shapepipe.utilities.canfar module shapepipe.utilities.cfis module shapepipe.utilities.file_system module shapepipe.utilities.galaxy module shapepipe_write_output() (in module shapepipe.modules.mccd_package.shapepipe_auxiliary_mccd) short_name (DESRho2SysTest attribute) (DESRho3SysTest attribute) (DESRho4SysTest attribute) (DESRho5SysTest attribute) (Rho1SysTest attribute) sigma_to_fwhm() (in module shapepipe.utilities.galaxy) sphere_dist() (Mask method) split_module_run() (in module shapepipe.pipeline.shared) split_mpi_jobs() (in module shapepipe.pipeline.mpi_run) SplitExposures (class in shapepipe.modules.split_exp_package.split_exp) SpreadModel (class in shapepipe.modules.spread_model_package.spread_model) square_from_centre() (in module shapepipe.utilities.cfis) square_from_corners() (in module shapepipe.utilities.cfis) stats_calculator() (MergeStarCatMCCD static method) std_calc() (MergeStarCatMCCD static method) StrInterpreter (class in shapepipe.pipeline.str_handler) strip_slash() (FileHandler static method) strip_slash_list() (FileHandler class method) submit_jobs() (JobHandler method) submit_mpi_jobs() (in module shapepipe.pipeline.mpi_run) submit_serial_job() (JobHandler method)

T

TabulatedText (BaseCatalogue.InputFormat attribute)

timeout (JobHandler property)

U

Uncompress (class in shapepipe.modules.uncompress_fits_package.uncompress_fits)

Undefined (BaseCatalogue.InputFormat attribute) use_memmap (FITSCatalogue property)

V

var_list() (param method) VignetMaker (class in shapepipe.modules.vignetmaker_package.vignetmaker)

vosError vosHandler (class in shapepipe.utilities.canfar)

W

with_timeout() (in module shapepipe.pipeline.timeout) worker() (WorkerHandler method)

WorkerHandler (class in shapepipe.pipeline.worker_handler) write_file() (PythonExample method)